> ## Documentation Index
> Fetch the complete documentation index at: https://demo.agenticlabs.com/llms.txt
> Use this file to discover all available pages before exploring further.

# __init__.py

## High-level description

This code defines the `__init__.py` file for the `cassiopeia.plotting` package, which provides utilities for visualizing phylogenetic trees. It imports and re-exports specific functions and classes from submodules to make them directly accessible at the package level.

## References

This file references symbols from the following files:

* `cassiopeia/plotting/itol_utilities.py`
* `cassiopeia/plotting/local.py`
* `cassiopeia/plotting/local_3d.py`

## Symbols

### Symbol Name

#### `__all__`

#### Description

A list of symbols to be exported when using `from cassiopeia.plotting import *`. This allows users to directly access these functions and classes without needing to know the specific submodules where they are defined.

#### Inputs

N/A - This is a variable definition, not a function.

#### Outputs

N/A - This is a variable definition, not a function.

#### Internal Logic

The list includes the following symbols:

* `upload_and_export_itol`: Uploads a tree to the iTOL web service and exports the visualization. (from `itol_utilities.py`)
* `plot_matplotlib`: Generates a static plot of a tree using Matplotlib. (from `local.py`)
* `plot_plotly`: Generates a dynamic plot of a tree using Plotly. (from `local.py`)
* `labels_from_coordinates`: Creates a synthetic labels array from cell coordinates for 3D plotting. (from `local_3d.py`)
* `Tree3D`: A class for creating and manipulating 3D projections of trees onto 2D surfaces. (from `local_3d.py`)