tools
__init__.py
High-level description
This file serves as the top level for the tools
module in the Cassiopeia library. It imports and exposes various functions and classes related to tree analysis, parameter estimation, and phylogenetic reconstruction. This module provides tools for tasks such as computing tree metrics, estimating mutation rates, and performing small parsimony analysis.
References
This file imports and re-exposes symbols from other modules within the cassiopeia.tools
package. These modules are:
cassiopeia.tools.autocorrelation
cassiopeia.tools.branch_length_estimator
cassiopeia.tools.coupling
cassiopeia.tools.fitness_estimator
cassiopeia.tools.parameter_estimators
cassiopeia.tools.small_parsimony
cassiopeia.tools.topology
cassiopeia.tools.tree_metrics
Symbols
This file does not define any new symbols, but it re-exports several symbols imported from other modules. The re-exported symbols are listed in the __all__
list. For detailed documentation of each symbol, please refer to the respective module where it is defined.