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High-level description

This file serves as the top-level module for the cassiopeia.simulator package, exposing various tree and data simulators for generating synthetic lineage tracing data. It imports and re-exports specific simulator classes, making them readily available for use in other parts of the codebase.

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Code Structure

This file simply imports classes from submodules within the cassiopeia.simulator package and defines a list __all__ to specify which symbols should be exported when using from cassiopeia.simulator import *.

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Symbols

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__all__

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Description

A list of strings representing the names of the simulator classes to be exported when using from cassiopeia.simulator import *.

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Internal Logic

The list includes the names of various tree and data simulators, such as BirthDeathFitnessSimulator, BrownianSpatialDataSimulator, Cas9LineageTracingDataSimulator, etc. These classes are responsible for generating synthetic lineage tracing data with different characteristics and underlying models.

UniformLeafSubsampler.pyOverview